SBIR-STTR Award

A peptide-based point-of-care vertical flow assay for the rapid diagnosis of Lyme disease
Award last edited on: 2/19/2024

Sponsored Program
SBIR
Awarding Agency
NIH : NIAID
Total Award Amount
$3,323,104
Award Phase
2
Solicitation Topic Code
855
Principal Investigator
Paul Michael Arnaboldi

Company Information

Biopeptides Inc

10457 Roselle Street Suite I
San Diego, CA 92121
   (800) 909-2494
   sales@biopeptide.com
   www.biopeptide.com
Location: Single
Congr. District: 52
County: San Diego

Phase I

Contract Number: 1R44AI150060-01A1
Start Date: 6/24/2020    Completed: 5/31/2021
Phase I year
2020
Phase I Amount
$300,000
There is an obvious need for new approaches and better assays for the laboratory diagnosis of Lyme disease. All attempts to develop a practical assay for the direct detection of Borrelia burgdorferi in infected patients have failed. Thus far, all proposed alternatives to serology have been unsuccessful, not cost-effective, or are still in early development. Improving serological detection in early disease is the fastest and most effective way to improve patient outcomes in Lyme disease. The antigen targets utilized in current serodiagnostic assays have considerable defects. They often contain conserved epitopes that cross-react with antibodies raised to other antigens, reducing specificity and requiring the use of a two-tier seroassay paradigm that preserves specificity at the cost of poor sensitivity in the detection of early disease. The use of peptides as serodiagnostic targets demonstrate improved efficacy, but the use of one or two peptides containing single epitopes still provides re- duced sensitivity in early disease. Putting the same old antigen targets into new platforms, no matter how in- novative the platform, will not succeed in improving serodiagnostics for Lyme disease. Both the target anti- gens and assays need an innovative approach. By incorporating unique peptides containing linear epitopes highly specific to B. burgdorferi, into a cutting-edge, multiplex, portable paper-based point-of-care diagnostic assay that uses a cost-effective smartphone-based reader, we aim to transform the diagnosis of Lyme disease. An ideal test for Lyme disease could be performed in a single step and yield an answer on the spot to support diagnosis and direct the course of clinical treatment. We have developed an innovative vertical-flow assay which allows for the multiplexed detection of IgM and IgG binding of up to 25 independent antigen targets in a point-of-care setting. The VFA design allows for uniform flow of sample across the target membrane, creating uniform binding conditions and maximizing developed signal. We coupled this design with a cost-effective portable smart-phone based reader allowing for quantitative measure of antibody binding, eliminating subjectiv- ity. By multiplexing peptide antigens each containing 1-2 epitopes unique to B. burgdorferi from multiple differ- ent antigens expressed at different stages during mammalian infection we can generate a single tier, POC as- say that can specifically and sensitively detect patient antibody at all stages of the disease. The assay can be completed in less than 25 min allowing for rapid in office results to support clinical diagnosis, thereby improving patient outcomes.

Public Health Relevance Statement:
Project Narrative Early diagnosis of Lyme disease is critical to prevent disease progression and sequelae; however current laboratory diagnostics that are used to support clinical diagnosis are insensitive during early infection, failing ~50% of the time. We propose the development of a sensitive and specific multi-antigen point-of-care assay that will provide immediate serological detection of antibodies against Borrelia burgdorferi, the causative agent of Lyme disease, to aid in physician diagnosis. Accurate, rapid diagnosis will improve patient outcomes by reducing the likelihood of developing potentially debilitating late stage disease through early antibiotic intervention.

Project Terms:
Antibiotics; Antibiotic Agents; Antibiotic Drugs; Miscellaneous Antibiotic; Antibodies; Epitopes; Antigenic Determinants; Binding Determinants; Antigens; immunogen; Bacterial Proteins; Bacterial Gene Products; Bacterial Gene Proteins; Biological Assay; Assay; Bioassay; Biologic Assays; Borrelia burgdorferi; B burgdorferi; B. burgdorferi; Borrelia burgdorferi sensu stricto; Lyme Disease Spirochete; lyme spirochete; Cells; Cell Body; Centers for Disease Control and Prevention (U.S.); CDC; Centers for Disease Control; Centers for Disease Control and Prevention; United States Centers for Disease Control; United States Centers for Disease Control and Prevention; Diagnosis; Laboratory Diagnosis; Disease; Disorder; Family; Goals; Immunoglobulin G; 7S Gamma Globulin; IgG; Immunoglobulin M; 19S Gamma Globulin; IgM; Infection; Laboratories; Lyme Disease; Lyme Borreliosis; Maps; Methods; Musculoskeletal System; locomotor system; Nervous system structure; Nervous System; Neurologic Body System; Neurologic Organ System; Paper; Legal patent; Patents; Patients; Peptides; Physicians; Proteins; Research; Serologic tests; Serological Tests; serology; Signal Transduction; Cell Communication and Signaling; Cell Signaling; Intracellular Communication and Signaling; Signal Transduction Systems; Signaling; biological signal transduction; Specificity; Technology; Testing; Time; Work; DBL Oncoprotein; oncogene protein DBL; p66; protein DBL; Generations; Measures; base; improved; Clinical; Phase; Serologic; Serological; Outer surface protein C; ospC; OspC protein; Individual; Ligand Binding Protein; Ligand Binding Protein Gene; Protein Binding; bound protein; Binding Proteins; Disease Progression; point of care testing; Bedside Testings; Spottings; clinical Diagnosis; Diagnostic; Nature; machine learned; Machine Learning; System; early detection; Early Diagnosis; membrane structure; Membrane; rapid diagnosis; Speed; member; Reporting; Sampling; cross reactivity; portability; Intervention Strategies; interventional strategy; Intervention; ImProv; Cell Phone; Cellular Telephone; iPhone; smart phone; smartphone; Cellular Phone; Molecular Interaction; Binding; preventing; prevent; CD61; CD61 Antigens; GP IIIa; GP3A; GPIIIa; ITGB3; Integrin Beta 3; Integrin beta3; Integrin ß3; NAIT; PTP gene; Platelet Fibrinogen Receptor, Beta Subunit; Platelet GPIIIa; Platelet Glycoprotein IIIa; Platelet Membrane Glycoprotein IIIa; ITGB3 gene; Address; Defect; Data; Detection; Reader; Antigen Targeting; trial regimen; trial treatment; Clinical Treatment; Patient outcome; Patient-Centered Outcomes; Patient-Focused Outcomes; SBIR; Small Business Innovation Research; Small Business Innovation Research Grant; developmental; Development; point of care; cost; multiplex detection; designing; design; new approaches; novel approaches; novel strategy; novel strategies; cost effective; blind; Coupled; innovate; innovative; innovation; Microbe; early therapy; Early treatment; relapsing fever borrelia; DbpB; decorin binding protein B; prototype; efficacy testing; point-of-care diagnostics; biological systems; screening; B miyamotoi; B. miyamotoi; Borrelia miyamotoi; diagnostic assay; preservation

Phase II

Contract Number: 4R44AI150060-02
Start Date: 6/24/2020    Completed: 6/30/2024
Phase II year
2021
(last award dollars: 2023)
Phase II Amount
$3,023,104

There is an obvious need for new approaches and better assays for the laboratory diagnosis of Lyme disease. All attempts to develop a practical assay for the direct detection of Borrelia burgdorferi in infected patients have failed. Thus far, all proposed alternatives to serology have been unsuccessful, not cost-effective, or are still in early development. Improving serological detection in early disease is the fastest and most effective way to improve patient outcomes in Lyme disease. The antigen targets utilized in current serodiagnostic assays have considerable defects. They often contain conserved epitopes that cross-react with antibodies raised to other antigens, reducing specificity and requiring the use of a two-tier seroassay paradigm that preserves specificity at the cost of poor sensitivity in the detection of early disease. The use of peptides as serodiagnostic targets demonstrate improved efficacy, but the use of one or two peptides containing single epitopes still provides re- duced sensitivity in early disease. Putting the same old antigen targets into new platforms, no matter how in- novative the platform, will not succeed in improving serodiagnostics for Lyme disease. Both the target anti- gens and assays need an innovative approach. By incorporating unique peptides containing linear epitopes highly specific to B. burgdorferi, into a cutting-edge, multiplex, portable paper-based point-of-care diagnostic assay that uses a cost-effective smartphone-based reader, we aim to transform the diagnosis of Lyme disease. An ideal test for Lyme disease could be performed in a single step and yield an answer on the spot to support diagnosis and direct the course of clinical treatment. We have developed an innovative vertical-flow assay which allows for the multiplexed detection of IgM and IgG binding of up to 25 independent antigen targets in a point-of-care setting. The VFA design allows for uniform flow of sample across the target membrane, creating uniform binding conditions and maximizing developed signal. We coupled this design with a cost-effective portable smart-phone based reader allowing for quantitative measure of antibody binding, eliminating subjectiv- ity. By multiplexing peptide antigens each containing 1-2 epitopes unique to B. burgdorferi from multiple differ- ent antigens expressed at different stages during mammalian infection we can generate a single tier, POC as- say that can specifically and sensitively detect patient antibody at all stages of the disease. The assay can be completed in less than 25 min allowing for rapid in office results to support clinical diagnosis, thereby improving patient outcomes.

Public Health Relevance Statement:


Public Health Relevance:
Early diagnosis of Lyme disease is critical to prevent disease progression and sequelae; however current laboratory diagnostics that are used to support clinical diagnosis are insensitive during early infection, failing ~50% of the time. We propose the development of a sensitive and specific multi-antigen point-of-care assay that will provide immediate serological detection of antibodies against Borrelia burgdorferi, the causative agent of Lyme disease, to aid in physician diagnosis. Accurate, rapid diagnosis will improve patient outcomes by reducing the likelihood of developing potentially debilitating late stage disease through early antibiotic intervention.

Project Terms:
Antibiotics; Antibiotic Agents; Antibiotic Drugs; Miscellaneous Antibiotic; Antibodies; Epitopes; Antigenic Determinants; Binding Determinants; Antigens; immunogen; Bacterial Proteins; Bacterial Gene Products; Bacterial Gene Proteins; Biological Assay; Assay; Bioassay; Biologic Assays; Borrelia burgdorferi; B burgdorferi; B. burgdorferi; Borrelia burgdorferi sensu stricto; Lyme Disease Spirochete; lyme spirochete; Cells; Cell Body; Centers for Disease Control and Prevention (U.S.); CDC; Centers for Disease Control; Centers for Disease Control and Prevention; United States Centers for Disease Control; United States Centers for Disease Control and Prevention; Diagnosis; Laboratory Diagnosis; Disease; Disorder; Family; Goals; Immunoglobulin G; 7S Gamma Globulin; IgG; Immunoglobulin M; 19S Gamma Globulin; IgM; Infection; Laboratories; Lyme Disease; Lyme Borreliosis; Maps; Methods; Musculoskeletal System; locomotor system; Nervous system structure; Nervous System; Neurologic Body System; Neurologic Organ System; Paper; Legal patent; Patents; Patients; Peptides; Physicians; Proteins; Research; Signal Transduction; Cell Communication and Signaling; Cell Signaling; Intracellular Communication and Signaling; Signal Transduction Systems; Signaling; biological signal transduction; Specificity; Technology; Testing; Time; Work; DBL Oncoprotein; oncogene protein DBL; p66; protein DBL; Generations; Measures; base; improved; Clinical; Phase; Serology; OspC protein; Outer surface protein C; ospC; Individual; Binding Proteins; Ligand Binding Protein; Ligand Binding Protein Gene; Protein Binding; bound protein; Disease Progression; Spottings; clinical Diagnosis; Diagnostic; Nature; machine learned; Machine Learning; System; early detection; Early Diagnosis; membrane structure; Membrane; rapid diagnosis; Speed; member; Reporting; Sampling; cross reactivity; portability; Intervention Strategies; interventional strategy; Intervention; ImProv; Cell Phone; Cellular Telephone; iPhone; smart phone; smartphone; Cellular Phone; Molecular Interaction; Binding; preventing; prevent; CD61; CD61 Antigens; GP IIIa; GP3A; GPIIIa; ITGB3; Integrin Beta 3; Integrin beta3; Integrin ß3; NAIT; PTP gene; Platelet Fibrinogen Receptor, Beta Subunit; Platelet GPIIIa; Platelet Glycoprotein IIIa; Platelet Membrane Glycoprotein IIIa; ITGB3 gene; Address; Defect; Data; Detection; Reader; Antigen Targeting; Clinical Treatment; trial regimen; trial treatment; Patient-Focused Outcomes; Patient outcome; Patient-Centered Outcomes; Small Business Innovation Research Grant; SBIR; Small Business Innovation Research; Development; developmental; point of care; cost; multiplex detection; design; designing; novel strategies; new approaches; novel approaches; novel strategy; cost effective; blind; Coupled; innovation; innovate; innovative; Microbe; Early treatment; early therapy; relapsing fever borrelia; decorin binding protein B; DbpB; prototype; public health relevance; efficacy testing; point-of-care diagnostics; biological systems; screening; Borrelia miyamotoi; B miyamotoi; B. miyamotoi; diagnostic assay; preservation; antibody detection; antibody based detection; detect antibodies; rapid test; rapid assay; rapid tests; point-of-care detection; detection assay; detection platform; detection system; point of care testing