SBIR-STTR Award

Development of Novel Anti-Biofilm Compounds for Treating Chronic Wounds
Award last edited on: 4/12/19

Sponsored Program
STTR
Awarding Agency
NIH : NIAID
Total Award Amount
$1,767,974
Award Phase
2
Solicitation Topic Code
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Principal Investigator
Laura M Guogas

Company Information

Agile Sciences Inc

1791 Varsity Drive Suite 150
Raleigh, NC 27606
   (919) 457-3308
   info@agilesci.com
   www.agilesci.com

Research Institution

Montana State University

Phase I

Contract Number: 1R41AI092952-01A1
Start Date: 7/15/11    Completed: 6/30/12
Phase I year
2011
Phase I Amount
$300,000
Chronic wounds that fail to respond to traditional therapeutic interventions afflict millions of people each year, and direct costs associated with treating these wounds are estimated at $5 to $10 billion annually. Eradication of pathogenic bacteria that have colonized chronic wounds is complicated by the propensity of these bacteria to form biofilms. A biofilm consists of a community of bacteria encompassed by an extracellular matrix that efficiently resists the action of antibiotics and the host immune response. Bacteria in the biofilm state are approximately 1000 times more resistant to antibiotics, and there are currently no reliable therapeutic strategies available for dispersing pre-formed biofilms. The co-founders of Agile Sciences have discovered a new class of small molecules, derived from a marine sponge natural product, that inhibits as well as disperses bacterial biofilms of both gram-positive and gram- negative bacteria, including bacteria commonly found in chronic wounds. These compounds are derived from a 2-aminoimidazole (2-AI) unit and represent the only class of non-toxic small molecules with the ability to disperse pre-formed bacterial biofilms. When applied to chronic wounds, these molecules are predicted to disperse bacterial biofilms into their more vulnerable planktonic state, so that the bacteria become significantly more susceptible to antibiotic therapies and to the host immune response. The goal of this work is to identify Agile molecules that are potent toward dispersing polymicrobial biofilms of chronic wound isolates under biomimetic conditions. Known structure-function relationships will guide the design of new analogues, which will be synthesized and screened for biofilm inhibition and dispersal of P. aeruginosa, S. aureus, and C. perfringens, bacteria that are most commonly isolated from chronic wounds. Once lead molecules are identified, their efficacy will be rigorously tested using in vitro wound biofilm models at the Center for Biofilm Engineering at Montana State University. These models include a drip-flow reactor, which will evaluate the ability of active analogues to remove biofilms of wound isolates under low-shear biofilm growth, as well as a biofilm and human cell co-culture scratch healing model, which will evaluate the synergistic relationship between active anti-biofilm molecules and antibiotics. The metric for success of the proposed work is to identify at least one analogue that disperses biofilms in all wound models, and demonstrates synergistic effects with antibiotics in the co-culture model by reducing scratch closure time. Analogues that successfully achieve these objectives will be advanced to a Phase II Study in which their therapeutic potential for promoting wound healing will be further assessed in vivo.

Public Health Relevance:
An estimated 1-2% of the population will suffer from persistent chronic wounds, and the difficulty in treating chronic wound infections has been attributed to bacteria9s ability to form biofilms. An innovative treatment for chronic wounds is being developed that removes bacteria from the biofilm state;this approach has the potential to significantly expedite the wound healing process.

Thesaurus Terms:
2-Cyclopentyl-5-(5-Isoquinolylsulfonyl)-6-Nitro-1h-Benzo(D)Imidazole;Antibiotic Agents;Antibiotic Drugs;Antibiotic Resistance;Antibiotic Therapy;Antibiotic Treatment;Antibiotics;Bacteria;Bed Sores;Bedsore;Biologic Factor;Biological Factors;Biological Mimetics;Biomimetics;C. Perfringens;C. Welchii;Cell-Extracellular Matrix;Cells;Chronic;Clostridium Perfringens;Clostridium Welchii;Co-Culture;Cocultivation;Coculture;Coculture Techniques;Communicable Diseases;Communities;Decubitus Ulcer;Defense Mechanisms;Development;Diabetic Ulcer;Direct Costs;E Coli;Ecm;Effectiveness;Engineering;Escherichia Coli;Extracellular Matrix;Generalized Growth;Goals;Gram-Negative Bacteria;Growth;Healed;Human;Immune Response;In Vitro;Infectious Disease Pathway;Infectious Diseases;Infectious Diseases And Manifestations;Infectious Disorder;Lead;Libraries;Lytotoxicity;Mrsa;Man (Taxonomy);Marines;Mediating;Methicillin Resistant S. Aureus;Methicillin Resistant Staphylococcus Aureus;Metric;Microbial Biofilms;Miscellaneous Antibiotic;Modeling;Modern Man;Montana;Natural Products;P. Aeruginosa;P.Aeruginosa;Pb Element;Phase;Phase I Study;Play;Population;Porifera;Predisposition;Pressure Sore;Pressure Ulcer;Probability;Process;Pseudomonas Aeruginosa;Pseudomonas Pyocyanea;Reporting;Research Proposals;Resistance To Antibiotics;Resistant To Antibiotics;Role;S. Aureus;S.Aureus;Science;Scientist;Spinal Column;Spine;Sponges;Sponges (Zoology);Staphylococcus Aureus;Structure;Structure-Activity Relationship;Surface;Susceptibility;Techniques;Testing;Therapeutic;Therapeutic Intervention;Time;Tissue Growth;Training;Universities;Varicose Ulcer;Venous Ulcer;Vertebral Column;Visit;Work;Wound Healing;Wound Infection;Wound Repair;Analog;Anti-Microbial;Antibiotic Resistant;Antimicrobial;Backbone;Bacterial Disease Treatment;Bacterial Infectious Disease Treatment;Base;Biofilm;Chemical Structure Function;Combinatorial;Compound-1;Cytotoxicity;Design;Designing;Developmental;Diabetes Ulcer;Experience;Healing;Heavy Metal Pb;Heavy Metal Lead;Host Response;Immunoresponse;In Vitro Model;In Vivo;Innovate;Innovation;Innovative;Intervention Therapy;Meetings;Methicillin Resistant Staphylococcus Aureus (Organism);Microorganism;Novel;Ontogeny;Pathogen;Pathogenic Bacteria;Phase 1 Study;Phase 2 Study;Phase Ii Study;Psychological Defense Mechanism;Scaffold;Scaffolding;Small Molecule;Social Role;Structure Function Relationship;Success;Tissue Repair;Wound

Phase II

Contract Number: 2R44AI092952-02A1
Start Date: 00/00/00    Completed: 00/00/00
Phase II year
2015
(last award dollars: 2016)
Phase II Amount
$1,467,974

Chronic wounds that fail to respond to traditional therapeutic interventions afflict millions of people each year, and direct costs associated with treating these wounds are estimated at $10-25 billion annually in the U.S. alone. Eradication of pathogenic bacteria that have colonized chronic wounds is complicated by the propensity of these bacteria to form biofilms. A biofilm consists of a community of bacteria encompassed by an extracellular matrix which efficiently resists the action of antibiotics and the host immune response. Bacteria in the biofilm state are approximately one-thousand times more resistant to antibiotics, and there are currently no reliable therapeutic strategies available for dispersing pr-formed biofilms. The scope of this SBIR project is to evaluate a new class of molecules, called the 2-aminoimidazoles (2-AIs), for treating biofilm-based infections in chronic wounds. The 2-AI molecules are the first class of non- microbicidal small molecules that have been shown to disperse biofilms of both Gram-positive and Gram- negative bacteria. Given the non-microbicidal nature of the 2-AI molecules, they do not create a selective environment that could lead to the development of resistance. Over one-hundred 2-AI molecules were synthesized in Phase I and evaluated for their activity using high-throughput screening at Agile Sciences and advanced in vitro models at the Center for Biofilm Engineering (CBE) at Montana State University. Through this effort, we identified a lead molecule, named H10, which effectively disperses robust biofilms of S. aureus and P. aeruginosa formed with a drip flow reactor. Furthermore, full closure of a wound in a human keratinocyte cell scratch closure model was achieved when conditioned media from S. aureus biofilms was treated with H10. These results provide strong in vitro evidence of the potential of the 2-AI compounds to treat biofilm-based infections in chronic wounds, and motivate our Phase II project. In Phase II, we will: 1) evaluate the effectiveness of H10 in two standard in vivo wound models (rabbit ear and porcine) and 2) conduct safety evaluations in order to inform subsequent IND-enabling toxicity studies. Evaluations of H10 as a topical therapeutic using the rabbit ear wound model and the pig wound model will be performed Dr. Robert Galiano of Northwestern (rabbit model) and Dr. Stephen Davis of the University of Miami (pig model) with Dr. Garth James of the CBE providing biofilm imaging support. Since H10 is non-microbicidal, it will be co-dosed with an antibiotic to provide synergistic removal of the biofilm in addition to killing of the bacteria. Contract Research Organizations that are well-versed in drug safety will perform genotoxicity, skin irritation, cytochrome P450 inhibition, and acute toxicity evaluations. The metric of success for this Phase II project is to identify an H10-antimicrobial combination that enhances wound healing in vivo and possesses a favorable toxicity profile. The combination therapy identified in this work will be advanced to IND-enabling toxicity studies to be conducted under GLP conditions in Phase III.

Public Health Relevance Statement:


Public Health Relevance:
An estimated 1-2% of the population will suffer from persistent chronic wounds, and the difficulty in treating chronic wound infections has been attributed to bacteria's ability to form biofilms. An innovative treatment for chronic wounds is being developed that removes bacteria from the biofilm state; this approach has the potential to significantly expedite the wound healing process.

Project Terms:
7alpha hydroxylase; Acute; Advanced Development; Antibiotic Resistance; Antibiotics; antimicrobial; Bacteria; Bacterial Infections; base; Caring; Cells; Chronic; Clinical; Collaborations; Combined Modality Therapy; Communities; Complication; Conditioned Culture Media; cost; Cytochrome P450; Data; Dermal; design; Development; Direct Costs; Dose; Dose-Rate; Drug Formulations; Ear structure; Effectiveness; Engineering; Environment; Evaluation; Excision; expectation; Extracellular Matrix; Family suidae; Fibroblasts; genotoxicity; Goals; Gram-Negative Bacteria; high throughput screening; Human; Image; Immune response; improved; In Vitro; in vitro Model; in vivo; in vivo Model; Infection; innovation; Institutes; keratinocyte; Killings; Lead; Mechanics; medical schools; Microbial Biofilms; microbicide; Modeling; Montana; Mus; Names; Nature; novel; Oryctolagus cuniculus; pathogenic bacteria; Pharmaceutical Preparations; Phase; Population; Process; programs; Pseudomonas; Pseudomonas aeruginosa; public health relevance; Reporting; Research Contracts; Resistance development; Safety; Science; Skin; skin irritation; Small Business Innovation Research Grant; small molecule; Staphylococcus aureus; success; Therapeutic; Therapeutic Intervention; Therapeutic Uses; Time; Topical Antibiotic; Toxic effect; United States; Universities; Work; wound; Wound Healing; Wound Infection