SBIR-STTR Award

Multiple Transgenic Models for Degenerative & Regenerative Research in Zebrafish
Award last edited on: 6/3/09

Sponsored Program
SBIR
Awarding Agency
NIH : NICHD
Total Award Amount
$1,478,790
Award Phase
2
Solicitation Topic Code
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Principal Investigator
Meera T Saxena

Company Information

Luminomics Inc

1120 15th Street
Augusta, GA 30912
   (706) 721-9344
   info@luminomics.com
   www.luminomics.com
Location: Single
Congr. District: 12
County: Richmond

Phase I

Contract Number: 1R43HD047089-01
Start Date: 7/1/04    Completed: 12/31/04
Phase I year
2004
Phase I Amount
$107,001
Degenerative diseases have become major health issues as the median age of humans has increased. The long-term goal of this project is to identify drugs, which promote the regeneration of specific cell types, thus reversing the effects of debilitating degenerative conditions. We have developed an inducible method of targeted cellular ablation in zebrafish, termed ZAP (zebrafish ablation-reporter protein), that will facilitate high-throughput approaches for: 1) Defining genes which regulate the regeneration of cell types relevant to specific degenerative conditions, and; 2) Identifying drugs which promote cell-type specific regeneration in mutational models of degenerative diseases. The ZAP transgenic platform provides the first opportunity to reveal the "genomics" of cellular regeneration in a vertebrate system and is inherently licensable as it can be applied to any degenerative disease state linked to the loss of discrete cells. Furthermore, mutational models link diseases to discrete molecular targets, reducing the time and cost of drug discovery. Specific aims are: 1. Mosaic expression of ZAP and control reporters in transient transgenic zebrafish. Plasmids will be assembled that, when co-injected, express ZAP and control reporter proteins in overlapping and non-overlapping subsets of cells in transient transgenic zebrafish embryos and larvae. 2. Targeted cellular ablation in ZAP-expressing zebrafish: Dosage, Specificity, Effectiveness. Transient transgenic zebrafish co-expressing ZAP and control plasmids will be used to test the characteristics of specific ablation-inducing agents and the responsiveness of individual cell and tissue types. After documenting expression patterns, reagents will be added to induce the ablation of ZAP expressing cells. Specificity will be assessed by monitoring ZAP-linked and control reporter expression. Effective pro-drug concentrations for targeted versus regional ablation effects, and protocols appropriate for high-throughput screening assays will be determined for individual ablation-inducing agents. 3. Create stable transgenic zebrafish lines expressing ZAPs in targeted cell types. Plasmids will be created that consist of cell-type specific promoter elements operably linked to ZAP expression sequences. Transgenic lines derived from the stable integration of these plasmids will serve as models of degenerative diseases such as Parkinson's disease.

Thesaurus Terms:
disease /disorder model, genetically modified animal, model design /development, molecular biology, regeneration developmental genetics, drug discovery /isolation, genetic regulation, high throughput technology, method development, plasmid, prodrug, reporter gene biotechnology, gene expression profiling, green fluorescent protein, zebrafish

Phase II

Contract Number: 2R44HD047089-02
Start Date: 7/1/04    Completed: 3/31/09
Phase II year
2007
(last award dollars: 2008)
Phase II Amount
$1,371,789

Zebrafish have a remarkable capacity for cellular regeneration and are amenable to mutational genetic screens. Accordingly, a transgenic zebrafish system that facilitates the removal of specific cell types and the detection of regenerative "replacement" cells has been developed. This inducible ablation platform, termed ZAP (zebrafish ablation-reporter protein), is based on the principle of cytotoxic pro-drug conversion and can be targeted to any genetically definable cell type. Transgenic expression of ZAPs can therefore be used to model any degenerative condition linked to the loss of specific cells or tissues. ZAPs consist of a pro-drug converting enzyme fused to a fluorescent reporter. The pro-drug converting enzyme converts otherwise innocuous substances into cellular toxins, facilitating inducible elimination of ZAP-expressing cells. The fluorescent reporter allows the presence or absence of targeted cell types to be tracked in living fish. Thus, the ZAP platform provides a means to discovering genetic pathways that regulate the regeneration of specific cell types from discrete adult stem cell populations. Proposed is the creation of a set of transgenic zebrafish lines designed to promote maximum flexibility regarding where, when, how much, and what color ZAPs are expressed. The Gal4-UAS system is employed as a modular component that separates transgene expression into elements conferring timing and location (Gal4-expressing "activator" lines) from elements specifying amount and type of transgene product produced (UAS:reporter "effector" lines). By mating different Gal4 and UAS lines, any expression pattern can be conferred to any reporter/effector gene. An enhancer trap approach, based on Tol2-mediated transposition, will be used to create a series of ~500 Gal4-expressing transgenic lines that allow specific cell types to be targeted. A complimentary series of UAS lines will facilitate control over ZAP expression levels and choice of fluorescent reporter color. Collectively then, these models will promote insight into the development, function, and regeneration of specific cell types. Accordingly, the transgenic lines generated will be characterized in detail and distributed to the larger research community. The short-term goal is to foster elucidation of the molecular mechanisms regulating adult stem cell niches within the regenerative biology research community. The long-term goal of this project is to promote the development of regenerative therapies capable of reversing the debilitating effects of degenerative conditions that plague humankind.

Thesaurus Terms:
There Are No Thesaurus Terms On File For This Project.