SBIR-STTR Award

Hls-Small Molecule Discovery At Novel Target for Fetal Hemoglobin Induction
Award last edited on: 9/14/17

Sponsored Program
SBIR
Awarding Agency
NIH : NHLBI
Total Award Amount
$325,051
Award Phase
2
Solicitation Topic Code
-----

Principal Investigator
Scott M Thacher

Company Information

Orphagen Pharmaceuticals Inc (AKA: Orphagen Biotechnology)

11558 Sorrento Valley Road Suite 4
San Diego, CA 92121
   (858) 481-6191
   info@orphagen.com
   www.orphagen.com
Location: Single
Congr. District: 50
County: San Diego

Phase I

Contract Number: 1R43HL124897-01A1
Start Date: 9/1/15    Completed: 7/31/17
Phase I year
2015
Phase I Amount
$164,374
Inherited beta-globinopathies, including sickle cell disease (SCD) and β-thalassemia (HLS13-04), are chronic blood disorders resulting from defects in hemoglobin (Hb) structure or synthesis. These diseases affect an estimated 70,000 people in the U.S. alone and much larger numbers in Africa, Europe, India, the Middle East and the Caribbean. The complications of SCD, by far the most common beta-globin disorder, include hemolytic anemia, painful ischemic crises, bacterial infections, stroke, and chronic lung and kidney disease. The major therapies for SCD and β-thalassemia include lifelong blood transfusions, treatment with hydroxyurea-a cytotoxic agent that modestly induces fetal hemoglobin (HbF, α2γ2)-or high risk transplantation of hematopoietic cells. Elevation of HbF is considered the most promising approach to treat SCD or to effect a remission or cure. A benign condition, hereditary persistence of fetal hemoglobinemia (HPFH), dramatically ameliorates or even prevents the symptoms of β-thalassemia and SCD. Significantly, in one form of HPFH, naturally-occurring mutations in the gene promoters of the fetal γ-globin chains Aγ and Gγ induce HbF to 10- 30% of the level of γ-globin in every red blood cell, sufficient to inhibit SCD.It has long been suggested that a pharmacological agent that replicates pancellular HbF induction could transform current therapy. The goal of this Phase I SBIR proposal is to identify small molecule ligands to a transcription factor, an orphan nuclear receptor (NR), that has a central role in silencing embryonic and fetal γ-globin expression in the adult, by binding to the promoters of the fetal γ-globin genes. To date, no valid ligands have been described for this target. Assay development and structural analysis also show that the NR target is likely to function similarly to other NRs, such as the steroid, retinoid, and thyroid receptors, by allosteri modulation of peptide affinity in response to ligand. We developed a cell-free high throughput screening (HTS) assay for this receptor that measures interaction with a short peptide derived from a transcriptional cofactor, a putative corepressor for this orphan NR. Our objective is to identify small molecules that disrupt corepressor peptide interaction with the orphan NR and to evaluate whether these negative modulators can derepress fetal γ-globin expression. In Aim 1 we will screen diverse compound libraries in the biochemical HTS assay to identify small molecule ligands that disrupt the interaction between the orphan NR and corepressor peptide. We will then determine in Aim 2 whether, in addition to regulating binding of corepressors, the ligands identified in Aim 1 also regulate corepressor interactions via the target receptor in cell culture. We also propose to increase ligand affinity (IC50 < 0.5 µM) by purchase and synthesis of analogs to initial hits. Finally, in Aim 3, we will test the ability of the identified ligands to ativate γ-globin expression in hematopoietic cells cultured in vitro. This pharmacological evaluation will enable more intensive drug discovery with SBIR Phase II support leading to testing of lead compounds in animal models of the β-globin disorders.

Public Health Relevance Statement:


Public Health Relevance:
About 70,000 Americans suffer from sickle cell disease and β-thalassemia. Annual medical costs exceed $1 billion. Elevation of fetal hemoglobin (HbF) is considered a highly promising approach to treat SCD or the β-thalassemias since the effects of the defective or absent α-globin chain can be overcome by induction of fetal γ-chain production. Safe and effective therapies that elevate HbF will be rapidly accepted. The goal of this Phase I project is to identify small molecule drug-like compounds to a unique transcription factor that regulates the levels of HbF. Our long-term goal is development of a small molecule oral medication to treat these very serious inherited β-globin disorders.

NIH Spending Category:
Biotechnology; Cooley's Anemia; Genetics; Hematology; Orphan Drug; Pain Research; Rare Diseases; Sickle Cell Disease

Thesaurus Terms:
Acute Erythroblastic Leukemia; Adult; Adverse Effects; Affect; Affinity; Africa; Alpha Globin; American; Analog; Animal Model; Assay Development; Bacterial Infections; Base; Benign; Beta Globin; Beta Thalassemia; Binding (Molecular Function); Binding Sites; Biochemical; Biological Assay; Blood Transfusion; Blood Treatment; Caribbean Region; Cd34 Gene; Cell Culture Techniques; Cells; Chronic; Chronic Lung Disease; Clinical; Cofactor; Complex; Cost; Counterscreen; Cultured Cells; Cytotoxic Agent; Data; Defect; Development; Disease; Disease Model; Disease Remission; Dna Binding; Drug Discovery; Drug Targeting; Effective Therapy; Embryo; Erythrocytes; Erythroid Cells; Europe; Evaluation; Family; Fetal; Fetal Globin; Fetal Hemoglobin; Funding; Gene Expression; Genes; Genetic; Genetic Transcription; Globin; Goals; Greek; Hematological Disease; Hematopoietic; Hematopoietic Cell Transplantation; Hemoglobin; Hemoglobinemia; Hemolytic Anemia; Hereditary Disease; High Risk; High Throughput Screening; Hormones; Human; Hydroxyurea; In Vitro; In Vivo; India; Inherited; Inhibitory Concentration 50; Kidney Diseases; Lead; Libraries; Life; Ligand Binding Domain; Ligands; Measures; Medical; Middle East; Modeling; Morbidity - Disease Rate; Mus; Mutation; Novel; Nuclear Orphan Receptor; Nuclear Receptors; Oral; Organ; Pain; Patients; Peptides; Pharmaceutical Chemistry; Pharmaceutical Preparations; Phase; Polymerization; Prevent; Production; Promotor (Genetics); Public Health Relevance; Publishing; Receptor; Receptor Function; Recruitment Activity; Regulation; Reperfusion Injury; Reporting; Research; Response; Retinoids; Role; Rxr; Rxra Gene; Sickle Cell Anemia; Sickle Hemoglobin; Sickling; Small Business Innovation Research Grant; Small Molecule; Stem Cells; Steroids; Stroke; Structure; Symptoms; Testing; Thalassemia; Thyroid Gland; Tool; Trait; Transcription Factor; X-R

Phase II

Contract Number: 5R43HL124897-02
Start Date: 9/1/15    Completed: 7/31/17
Phase II year
2016
Phase II Amount
$160,677
Inherited beta-globinopathies, including sickle cell disease (SCD) and β-thalassemia (HLS13-04), are chronic blood disorders resulting from defects in hemoglobin (Hb) structure or synthesis. These diseases affect an estimated 70,000 people in the U.S. alone and much larger numbers in Africa, Europe, India, the Middle East and the Caribbean. The complications of SCD, by far the most common beta-globin disorder, include hemolytic anemia, painful ischemic crises, bacterial infections, stroke, and chronic lung and kidney disease. The major therapies for SCD and β-thalassemia include lifelong blood transfusions, treatment with hydroxyurea-a cytotoxic agent that modestly induces fetal hemoglobin (HbF, α2γ2)-or high risk transplantation of hematopoietic cells. Elevation of HbF is considered the most promising approach to treat SCD or to effect a remission or cure. A benign condition, hereditary persistence of fetal hemoglobinemia (HPFH), dramatically ameliorates or even prevents the symptoms of β-thalassemia and SCD. Significantly, in one form of HPFH, naturally-occurring mutations in the gene promoters of the fetal γ-globin chains Aγ and Gγ induce HbF to 10- 30% of the level of γ-globin in every red blood cell, sufficient to inhibit SCD.It has long been suggested that a pharmacological agent that replicates pancellular HbF induction could transform current therapy. The goal of this Phase I SBIR proposal is to identify small molecule ligands to a transcription factor, an orphan nuclear receptor (NR), that has a central role in silencing embryonic and fetal γ-globin expression in the adult, by binding to the promoters of the fetal γ-globin genes. To date, no valid ligands have been described for this target. Assay development and structural analysis also show that the NR target is likely to function similarly to other NRs, such as the steroid, retinoid, and thyroid receptors, by allosteri modulation of peptide affinity in response to ligand. We developed a cell-free high throughput screening (HTS) assay for this receptor that measures interaction with a short peptide derived from a transcriptional cofactor, a putative corepressor for this orphan NR. Our objective is to identify small molecules that disrupt corepressor peptide interaction with the orphan NR and to evaluate whether these negative modulators can derepress fetal γ-globin expression. In Aim 1 we will screen diverse compound libraries in the biochemical HTS assay to identify small molecule ligands that disrupt the interaction between the orphan NR and corepressor peptide. We will then determine in Aim 2 whether, in addition to regulating binding of corepressors, the ligands identified in Aim 1 also regulate corepressor interactions via the target receptor in cell culture. We also propose to increase ligand affinity (IC50 < 0.5 µM) by purchase and synthesis of analogs to initial hits. Finally, in Aim 3, we will test the ability of the identified ligands to ativate γ-globin expression in hematopoietic cells cultured in vitro. This pharmacological evaluation will enable more intensive drug discovery with SBIR Phase II support leading to testing of lead compounds in animal models of the β-globin disorders.

Public Health Relevance Statement:


Public Health Relevance:
About 70,000 Americans suffer from sickle cell disease and β-thalassemia. Annual medical costs exceed $1 billion. Elevation of fetal hemoglobin (HbF) is considered a highly promising approach to treat SCD or the β-thalassemias since the effects of the defective or absent α-globin chain can be overcome by induction of fetal γ-chain production. Safe and effective therapies that elevate HbF will be rapidly accepted. The goal of this Phase I project is to identify small molecule drug-like compounds to a unique transcription factor that regulates the levels of HbF. Our long-term goal is development of a small molecule oral medication to treat these very serious inherited β-globin disorders.

NIH Spending Category:
Biotechnology; Cooley's Anemia; Genetics; Hematology; Minority Health; Orphan Drug; Pain Research; Rare Diseases; Sickle Cell Disease

Project Terms:
Acute Erythroblastic Leukemia; Adult; Adverse effects; Affect; Affinity; Africa; alpha Globin; American; analog; Animal Model; assay development; Bacterial Infections; base; Benign; beta Globin; beta Thalassemia; Binding; Binding Sites; Biochemical; Biological Assay; Blood Transfusion; blood treatment; Caribbean region; CD34 gene; Cell Culture Techniques; Cells; Chronic; Chronic lung disease; Clinical; cofactor; Complex; cost; counterscreen; Cultured Cells; Cytotoxic agent; Data; Defect; Development; Disease; Disease model; Disease remission; DNA Binding; drug discovery; Drug Targeting; effective therapy; Embryo; Erythrocytes; Erythroid Cells; Europe; Evaluation; Family; fetal; fetal globin; Fetal Hemoglobin; Funding; gamma Globin; Gene Expression; Genes; Genetic; Genetic Transcription; Globin; Goals; Greek; Health; Hematological Disease; Hematopoietic; hematopoietic cell transplantation; Hemoglobin; Hemoglobinemia; Hemolytic Anemia; Hereditary Disease; high risk; high throughput screening; Hormones; Human; hydroxyurea; In Vitro; in vivo; India; Inherited; Kidney Diseases; Lead; Libraries; Life; Ligand Binding Domain; Ligands; Measures; Medical; Middle East; Modeling; Morbidity - disease rate; Mus; Mutation; novel; Nuclear Orphan Receptor; Nuclear Receptors; Oral; Organ; Pain; Patients; Peptides; Pharmaceutical Chemistry; Pharmaceutical Preparations; Phase; polymerization; prevent; Production; promoter; Publishing; receptor; receptor function; Recruitment Activity; Regulation; Reperfusion Injury; Reporting; Research; response; Retinoids; Role; RXR; RXRA gene; Sickle Cell Anemia; Sickle Hemoglobin; sickling; Small Business Innovation Research Grant; small molecule; Stem cells; Steroids; stroke; Structure; Symptoms; Testing; Thalassemia; Thyroid Gland; tool; trait; Transcription Coactivator; transcription factor; X-